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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015945717.1_cds_XP_016488127.1_78797
CDS Infomation

[gene=LOC107808147] [db_xref=GeneID:107808147] [protein=pollen-specific protein SF21-like isoform X3] [protein_id=XP_016488127.1] [location=complement(join(10596..10817,10933..11068,11855..11910,12046..12102,12188..12265,12391..12477,12772..12832,13107..13204,13307..13404,13757..13856,15690..15743))] [gbkey=CDS]
Sequence

ATGCAACTAACAACAAGGTCGATTATCATCAAGAATAATGGAATCCAAAAGACGGAGCAC
CTTGTAAAAACTGGCCATGGTTCCGTCTCTGTTGTTGTTTTTGGGGACCAGGACAAGCCA
GCTCTTATCACCTATCCCGACTTAGCTTTAAATTATATGTCCTGTTTTCAAGGAGTATTC
TTTTGTCCAGAAGCATTTTCATTGCTGCTCCATAACTTCTGTATTTACCATATAAGTCCT
CCTGGTCATGAGTTTTTGCAGTTGGGAGCTGCTGTGATGAGTCTTGATGATCCAGTTTTA
TCGGTTGATGATTTGGCAGACCAGATTGCTGAGGTGCTTGATTACTTCGGGCTTGGTAAA
GTAATGTGTATGGGAGTAACAGCTGGAGCATATGTGCTTACCTTGTTTGCTATAAAATAT
ACACGAAGGGTTATGGGTTTGATGCTCATTTCCCCTTTGTGCCAAGCACCATCTTGGACA
GAATGGTTGTGCAATAAGGTGATGACGAATCTGCTTTACTTTTGTGGCATGTGTAGTTTG
GTGAAGGAGTTATTGCTGTTGCGGTACTTTAGCAAGGAAGTCCGCGGCAGTGTTGAAGTT
CCAGAATCAGATGTAGTTCAAGCATGCCGAAGATTGCTTGGTGAGCGACAGAGTCCAAAT
GTATTGCGGTTTCTTGAAGCTATCAATGAGAGACCAGACATAACCAAAGGCCTGAGGAAA
CTGCAATGTCGTTCTTTAATATTTGTTGGAGAAAACTCTCCTTTCCATTCTGAAGCTCTC
CATATGACTTCGAAGCTAGATAGAAGGTTCAGCGCCCTAGTTGAGGTTCAAGCATGTGGT
TCAATGGTGACTGAAGAGCAGCCAGATGCAATGTTGATTCCACTGGAATACTTTCTCATG
GGATTTGGCTTTTATCGGCCGTCTAAGTGCAGTGTCAGCCCAAGAAGCCCTTTAAGTCCG
ACTAGCATCTCTCCGGAGCTTTTCTCACCAGAAAGTATGGGCTTGAAGTTAAAACCAATT
AAAACCAGAATATCTGGAGAAGTATGA

Peptide Sequence

PEP ID

XP_016488127.1
PEP Infomation

PREDICTED: pollen-specific protein SF21-like isoform X3 [Nicotiana tabacum]
Sequence

MQLTTRSIIIKNNGIQKTEHLVKTGHGSVSVVVFGDQDKPALITYPDLALNYMSCFQGVF
FCPEAFSLLLHNFCIYHISPPGHEFLQLGAAVMSLDDPVLSVDDLADQIAEVLDYFGLGK
VMCMGVTAGAYVLTLFAIKYTRRVMGLMLISPLCQAPSWTEWLCNKVMTNLLYFCGMCSL
VKELLLLRYFSKEVRGSVEVPESDVVQACRRLLGERQSPNVLRFLEAINERPDITKGLRK
LQCRSLIFVGENSPFHSEALHMTSKLDRRFSALVEVQACGSMVTEEQPDAMLIPLEYFLM
GFGFYRPSKCSVSPRSPLSPTSISPELFSPESMGLKLKPIKTRISGEV

Transcript Sequence

Gene sequence data has not been registered.